Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHYHFVGIKGSGMSSLAQIMHDLGHEVQGSDIENYVFTEVALRNKGIKILP-FDANNI---KEDMVVIQGNAFASSHEEIVRAHQLKLDVVSYNDFLGQ-IIDQYTSVAVTGAHGKTSTTGLLSHVMN-GDKKTSFLIGD-----GTGMGLPE---------SDYFAFEACEY-------RRHFLSYKPDYAIMTNIDFDHPDYFKDINDVFDAFQEMAHNVK-KGIIAWGDDEHLRKIEAD----VPIYYYGFKDSDDIYAQNIQITDKGTAFDVYVDGEFYDHFLSPQYGDHTVLNALAVIAISYLEKLDVTNIKEALETFGGVKRRFNETTIANQVIVDDYAHHPREISATIETARKKYPHKEVVAVFQPHTFSRTQAFLNEFAESLSKADRVFLCEIFGSIRENTGALTIQDLIDKIEGASLINEDSINVLEQFDNAVVLFMGAGDIQKLQNAYLDKLGMKNAF |
| 3EAG Chain:A ((6-326)) | --HIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVI-GNVAKRGMDVVEAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYAGLAPGFLIGGVPENFGVSARLPQTPRQDPNSQSPFFVIEADEYDTAFFDKRSKFVHYRPRTAVLNNLEFDHADIFADLGAIQTQFHYLVRTVPSEGLIVCNGRQQSLQDTLDKGCWTPVEKFGTE-----HGWQAGEANADGSFDVLLDGKTAGRVKWDLMGRHNRMNALAVIAAARHVGVDIQTACEALGAFKNVKR-------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EAG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186650 for 2499 contacts (-74.7/contact) +
2D Compatibility (PS) -31490 + (NN) -14217 + (LL) 11160
1D Compatibility (HY) -18000 + (ID) 4700
Total energy: -243897.0 ( -97.60 by residue)
QMean score : 0.570
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