Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALLKNFFIGLSNNSFLNNAAKKVGPRLGANKVVAGNTIPELINTIEYLNDKNIAVTVDNLGEFVGTVEESNHAKEQILTIMDALHQ--------------------HGVKAHMSVKLSQLGA-------EFDLELAYQNLREILLKANTYNNMHINIDTEKYASLQQIVQVLDRLKGEFRN---VGTVIQAY-------------LYDSHKLVDKYQDLRLRLVKGAYKENESI----------AFQSKEDVDANYIKIIEQRLLNAR-NFTSIATHDHRIINHVKQFMKENHIEKDRMEFQMLYGFRSELAEEIANEGYNFTIYVPYGD--DWFAYFMRRLAERPQNLSLAVKEFVKPAGLKRVGIIAALGATVMLGLSTIKKLCRK |
| 4NME Chain:A ((117-455)) | -----------------------------ARQFIVGETTKEAVKNLEKLRKDGFAAVVDVLGEATLSEEEAEVYTNTYLELLEALKKEQGSWKGLPGKGGDPGLDWGHAPKVNIAVKPTALFCLANPQDFEGSVVAILDRMRRIFKKVMELNGF-LCIDMESYRHKEIILEVFRRLKLEYRDYPHLGIVLQAYLKDNDKDLDDLLAWAKEHKV-----QISVRLVKGAYWDYETVKAKQNDWEVPVWTIKAESDAAYERQARKILENHQICHFACASHNIRTISAVMEMARELNVPEDRYEFQVLYGM---VRKGILKVAGRIRLYAPYGNMVPGMGYLVRRLLENTANESFLRQSFAEDAQIERL----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NME.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116753 for 2118 contacts (-55.1/contact) +
2D Compatibility (PS) -29608 + (NN) -9022 + (LL) 4160
1D Compatibility (HY) -18000 + (ID) 4400
Total energy: -173623.0 ( -81.97 by residue)
QMean score : 0.463
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