Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MTTLATLIFLVTLLFVLWQPKGLDIGITALTGAFIAVITGVVSFSDVFEVTGIVWNATLTFVSVILISLILDKVGLFEWSAIHMLHASKGNGLKMFVYIILLGA--IVAAFFANDGAALILTPIVLAMVKNIGFSKRAIFPFIIASGFIADTTSLPLIVSNLVNIISADYFHVGFV---RYFSRMIIPNLFSLLASIIVLWLYFRKAIPKTFDDNNIKHPKDAINDLKLFKISWIVLVILLFGYLISEFTKIPVSIFTGIIA--FIFLMLARKSNAVNIKQVIKGAPWNIVLFSIGMYIVVFGLRNAGITLILAKILEYISNYGLFSTILGMGFISAFLSSIMNNMPTVLIDAIAIGQSNVHGMLKEGLIYANVIGSDLGPKITPIGSLATLLWLHVLTQKDVKISWGTYFKTGIIITIPVLFITLIGLYLTLIIF |
| 4P5F Chain:A ((8-374)) | LTPTEAAVLRELRLHRPQLPLDTLLFTDPNKDPDDVVTYTIAKQLQA--DGFLRLTDVVVTLG---DADMRSQRAQLAKGVFDRLALPD------VRVARGQDYPMTSTQAREHSKFLAEGAALRAAPDAVHTDGVRAMCERLATSPHKLGMVVIAG--MTDASALLAEAGDLVREKVASITIMGGIDPARDADGLVQPD---------------------TRAYNNATDIHAARALYRRAQQLGIPLRIL--TKEAAYKAAVPPAFYEGIARNGHPVGEYLRDVQKNALKGLWEGIQANLIP---GLDTAWFFRTFVAGALSFDAIWPQVTKLNLYDPLTLLAALPGTARLLFQPTP----------------MHREG-----------ASPVEHVGHAE------VVRPEKARLLLSALAKAALV-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P5F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -366203 for 3036 contacts (-120.6/contact) +
2D Compatibility (PS) -33760 + (NN) 6451 + (LL) 10024
1D Compatibility (HY) -800 + (ID) 2950
Total energy: -387238.0 ( -127.55 by residue)
QMean score : 0.238
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