Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKKKMLAATLSVGLIAPLASPIQESRANTNIENIGDGAEVIKRTEDVSSKKWGVTQNVQFDFVKDKKYNKDALIVKMQGFINSRTSFSDVKGSGYELTKRMIWPFQYNIGLTTKDPNVSLINYLPKNKIETTDVGQTLGYNIGGNFQSAPSIGGNGSFNYSKTISYTQKSYVSEVDKQNSKSVKWGVKANEFVTPDGKKSAHDRYLFV------QSPNGPTGSAREYFAPDNQLPPLVQSGFNPSFITTLSHEKGSSDTSEFEISYGRNLDITYATL--FPRTGIYAERKHNAFVNRNFVVRYEVNWKTHEIKVKGHN |
| 1T5R Chain:A ((3-284)) | ------------------------------NIENIG--AEVVKRTEDTSSDKWGVTQNIQFDFVKDKKYNKDALILKMQGFINSKTTYYNYKNTDH--IKAMRWPFQYNIGLKTNDPNVDLINYLPKNKIDSVNVSQTLGYNIGGNFNS--------SFNYSKTISYNQQNYISEVEHQNSKSVQWGIKANSFIT---KMSGHDPNLFVGYKPYSQNP-------RDYFVPDNELPPLVHSGFNPSFIATVSHEKGSGDTSEFEITYGRNMDVTHATRRT--NSYLEGSRIHNAFVNRNYTVKYEVNWKTHEIKVKGHN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T5R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55228 for 2058 contacts (-26.8/contact) +
2D Compatibility (PS) -27606 + (NN) -11534 + (LL) 1400
1D Compatibility (HY) -26800 + (ID) 9600
Total energy: -129368.0 ( -62.86 by residue)
QMean score : 0.476
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