Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKSVAIIGAGITGLSSAYFLKQQDPNIDVTIFEASNRPGGKIQSYR-KDGYMIELGP-----ESYLGRKTIMTELAKDIGLEQDIVTNTTGQSYIFAKNKLYPIPGGSIMGIPTDIKPFVTTKLISPLGK--LRAGLDLIKKPIQMQDGDISVGAFFRARLGNEVLENLIEPLMGGIYGTDIDKLSLMSTFPNFKEKEEAFGSLI------KGMKDEKNKRLKQRQLYPGAPKGQFKQFKHGLSSFIEALEQDVKNKGVTIRYNTSVDDI-ITSQKQYKIVYSNQQEDVFDGVLVTTPHQVFLNWFGQD--PAFDYFKTMDSTTVATVVLAFDEKDIENTYDGTGFVIARTSDTDITACTWTSKKWPFT--TPEGKVLIRAYVGKPGDTVVDDHTDNELVS------IVRRDLSQMMTFKGDPEFTIVNRLPKSMPQYHVGHIQQIRQIQAHIKQTYPRLRVTGASFEAVGLPDCITQGKVAAEEVIAEL |
| 4IVM Chain:B ((8-477)) | -GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPGGIRPAGALGARTLL--LVSELGLDSEVLPVRG--DHPAAQNRFLYV-GGALHALPTGLR----PS--PPFSKPLFWAGLRELTKP-RGKEPDETVHSFAQRRLGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLG-----QPDSALIRQAL---AERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSSLEA-DHVISAIPASVLSELLPAEAAPLARALSAITAVSVAVVNLQYQGAHL--PVQGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPG---LRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGASYEGVAVNDCIESGRQAAVSVL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IVM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173724 for 3712 contacts (-46.8/contact) +
2D Compatibility (PS) -47774 + (NN) -25521 + (LL) 1872
1D Compatibility (HY) -26800 + (ID) 5600
Total energy: -277547.0 ( -74.77 by residue)
QMean score : 0.459
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