Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSETIFGKILTGEIPSFKVYEDDYVYAFLDISQVTKGHTLLIPKKASANIFETDEETMKHIGAALPKVANAIKRAFNPDGLNIIQNNGEFADQSVFHIHFHLIPRYENDIDGFGYKWETHEDILDNDAKQQIAEQIQAQF
3OXK Chain:A ((9-107))
---CIFCKIAQKQIPSTIVYEDDEIFAFKDINPIAPIHILVIPKQHIASLNEITEENEAFIGKVLYKVS-LIGKKECPEGYRVVNNIGEDAGQTVKHIHFHIL-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3OXK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60330 for 677 contacts (-89.1/contact) +
2D Compatibility (PS) -10455 + (NN) -3135 + (LL) 2548
1D Compatibility (HY) -7200 + (ID) 2200
Total energy: -80772.0 ( -119.31 by residue)
QMean score : 0.470
(partial model without unconserved sides chains):
PDB file :
Tito_3OXK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OXK-query.scw
PDB file :
Tito_Scwrl_3OXK.pdb
: