Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVNLYDYANQLEQALRESEEYKAIKEAFANVKANEESKKL------FDEFRETQINFQQKQMQGEEIAEEDLQKAQEQAQAIEKDENISALMNAEQKMSQVFQEINQIIVKPLDEIYAD
3ZMS Chain:A ((469-550))
--VNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILD------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3ZMS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 15699 for 338 contacts (46.4/contact) +
2D Compatibility (PS) -8329 + (NN) -4459 + (LL) 3604
1D Compatibility (HY) -2000 + (ID) 950
Total energy: 3565.0 ( 10.55 by residue)
QMean score : 0.433
(partial model without unconserved sides chains):
PDB file :
Tito_3ZMS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZMS-query.scw
PDB file :
Tito_Scwrl_3ZMS.pdb
: