Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKDKDPKLNYHEEENSMVTDFEDLKELGKEMEQISDQNDQEKNSEEDSQ
3D7J Chain:A ((64-81))
-------------DEDNIVVDIGLATQELGA-------------------
General information:
TITO was launched using:
RESULT:
Template:
3D7J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4696 for 64 contacts (73.4/contact) +
2D Compatibility (PS) -2000 + (NN) -1357 + (LL) 1316
1D Compatibility (HY) -400 + (ID) 150
Total energy: 2105.0 ( 32.89 by residue)
QMean score : 0.307
(partial model without unconserved sides chains):
PDB file :
Tito_3D7J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D7J-query.scw
PDB file :
Tito_Scwrl_3D7J.pdb
: