Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYQQSSFKENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVIDYYHRFVERFPTVEVLSQASEDEVLKYWEGLGYYSRARNFHTAIKEVYDKYEGLVPKDPDQFKALKGVGPYTQAAVMSIAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQ---ELLPYVTTEAGTFNQAMMELGALICTPKNPLCLFCPVQENCEAFDKGTFEKLPVKSKNVSKKVIEQSVFLIRNNQGQYLLQKR-SEKLLHGMWQFPMFESEHARRK------MTEKIGHDIQPVETPIFELKHQFTHLTWKIKVYAA----SGAIN--IETLPDDMIWFNLSDRDQYTFPVPMSKIYQFING |
| 4YPR Chain:A ((11-356)) | -FPAREFQRDLLDWFARERRDLPWRKDRDPYKVWVSEVMLQQTRVETVIPYFEQFIDRFPTLEALADADEDEVLKAWEGLGYYSRVRNLHAAVKEVKTRYGGKVPDDPDEFSRLKGVGPYTVGAVLSLAYGVPEPAVNGNVMRVLSRLFLVTDDIAKCSTRKRFEQIVREIMAY--ENPGAFNEALIELGALVCTPRRPSCLLCPVQAYCQAFAEGVAEELPVKMKKTAVKQVPLAVAVLADDEGRVLIRKRDSTGLLANLWEFPSCETDGADGKEKLEQMVGEQYGLQVELTE-PIVSFEHAFSHLVWQLTVFPGRLVHGGPVEEPYRLAPEDEL-------KAYAFPVSHQRVWR---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YPR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169589 for 2578 contacts (-65.8/contact) +
2D Compatibility (PS) -33531 + (NN) -1021 + (LL) 968
1D Compatibility (HY) -34800 + (ID) 7900
Total energy: -245873.0 ( -95.37 by residue)
QMean score : 0.484
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