Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMEVCPYLEETFKILGRSWNGLIINYLSRCNDCSAHFSDMKRDLKTITPRALSLKLSELAQWELVEKQIISTSPVQIIYVLTEKGKALAEALHPIEAWAQSYVDLTDQRTAK
4GCV Chain:A ((38-103))
-----------------------------------RFDEFSRSLD-IAPNMLTRRLNALVEAGLLERQPYSQRP-RYQYVPTAKGEDFRVVLMAFVAWGNRH----------
General information:
TITO was launched using:
RESULT:
Template:
4GCV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16825 for 338 contacts (-49.8/contact) +
2D Compatibility (PS) -7238 + (NN) -4274 + (LL) 3444
1D Compatibility (HY) -4400 + (ID) 1050
Total energy: -30343.0 ( -89.77 by residue)
QMean score : 0.624
(partial model without unconserved sides chains):
PDB file :
Tito_4GCV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GCV-query.scw
PDB file :
Tito_Scwrl_4GCV.pdb
: