Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVGIDAGGTLIKIVQEQDNQRTFKTELTKNIDQVVEWLNQQQIEKLCLTGGNAGVIAENINIPAQIFVEFDAASQGLGILLKEQGHDLADYIFANVGTGTS-LHYFDGQSQRRVGGIGTGGGMIQGLGYLLSQITDYKQLTDMAQHGDRNTIDLKVRHIY-KDTEP-PIPGDLTAANFGHVLHHLDADFTPSNKLA-AVIGVVGEVVTTMAITVAREFKTENIVYIGSSFHNNALLRKVVE---DYTVLRGCKPYYVENGAFSGAIGALYLGK |
| 3SMP Chain:A ((200-377)) | --------------------------------------------------------------------------------------------LLVNMGSGVSILAVYSKDNYKRVTGTSLGGGTFLGLCCLLTGCETFEEALEMAAKGDSTNVDKLVKDIYGGDYERFGLQGSAVASSFGNMMSKEKRDSISKEDLARATLVTITNNIGSIARMCALNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGAL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SMP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86011 for 1251 contacts (-68.8/contact) +
2D Compatibility (PS) -18027 + (NN) -7433 + (LL) 6916
1D Compatibility (HY) -12000 + (ID) 2350
Total energy: -118905.0 ( -95.05 by residue)
QMean score : 0.364
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