Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIRFDNVSYTYQKGTPYQHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPESQLFEDTVEREMIFGPKNFKMNLD-----EAKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSILAMNPDIIVVDEPTAGLDPQSKRQVMRLLKSLQTDENKAIILISHDMNEVARYADEVIVMKEGSIVSQTSPKELFKD-KKKLAD------WHIGLPEIVQLQYDFEQKYQTKLKDIALTEEAFVSLYKEWQHEK |
| 3DHW Chain:C ((2-260)) | --IKLSNITKVFHQGT-RTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTK-ARRQIGMIFQH------FNLLSSRTVFGNVALPLELDNTPKDEVKRRVTELLSLVGLG-DKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPE------DYQERLQAE---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DHW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105173 for 1948 contacts (-54.0/contact) +
2D Compatibility (PS) -26600 + (NN) -12432 + (LL) 3660
1D Compatibility (HY) -19600 + (ID) 4250
Total energy: -164395.0 ( -84.39 by residue)
QMean score : 0.431
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