Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MILKFDHIIHYIDQLDRFS--F-PGDVIKLHSGGYHHKYGTFNKLGYI--NENYIELLDVENNEKLKKM----AKTIEG--GVAFATQIVQEKYEQGFKNICLRTNDIEAVKNKLQSEQVEVVGPIQMERDTHKDGKVKWQLLYIMNQDDDEIKPPFFIQWEESDSMRTKKL--------QKYFQKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEENDHYTDLILKNDDIYFRIEDGKVSKYHSVIIKDAQATSPYSIFIRGAIYRFEPLV |
| 1SQD Chain:A ((23-249)) | -VKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASIPSFDHGSCRSFF-SSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIV---LN-E---AVTIAEVKLY---GDVVLRYVSYKAE---FLPGFERVEDASSFPLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAE------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SQD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46239 for 1342 contacts (-34.5/contact) +
2D Compatibility (PS) -19474 + (NN) -2208 + (LL) 4228
1D Compatibility (HY) 400 + (ID) 500
Total energy: -63793.0 ( -47.54 by residue)
QMean score : 0.358
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