Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKKVYFNHDGGVDDLVSLFLLLQM-ENVQLIGVSTIGADCYLEPSLSASVKIINRFSNEDIQVAPSYERGK------NPFPKEWRMHAFFMDALPILN--------EPVKHVASNVSDKEAFEDIIQTLKRQSEKVTLLFTGPLTDLAKALQK-DSSIVQYIEKLVWMGGTFLPKGNVEEPEHDGSAEWNAYWDPEAVKIVFDS-DIEIDMVALESTNQVPL-TLDVRQRWANERQYTGIDFLGVSYAAVPPLTHFITNSTYFLWDVLTTAYIGNKDLVHSIEKKVDV-ISYGPSQGKTFECKDGRKINVINHVDNNAFFDYITALAKKVN |
| 4I70 Chain:A ((1-294)) | MAKTVILDHDGNKDDFVAMILLLSNPKKVNLIGCICTDADCFVENGFDVTGKIMCAMHR--LIKTPLFPIGKSTATAVNAFPTEWRFSAKNLDDMPFLNIVEDVALWEKLKPENEAHNGQQLLADLVM---KSKEKVTVCVTGPLSNMAWCIEKYGEAFTSKVEECVIMGGAVDVGGNVFLPTTDGSAEWNIYWDPPAAKKVLCCPNIRCVLFSLDATNTVPVRSVDVKG-FGAQNQYLLSQMVGTMWAM-----------AYYAWDALTAAYILEPTIATLEPVALDVDVSKGKSEGRT-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I70.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141351 for 2362 contacts (-59.8/contact) +
2D Compatibility (PS) -27749 + (NN) -8888 + (LL) 2980
1D Compatibility (HY) -23200 + (ID) 4950
Total energy: -203158.0 ( -86.01 by residue)
QMean score : 0.455
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