Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKHLQDHIQFLEQFINNVNALTAKMLKDLQNEYEISLEQSNVLGMLNKEPLTISEITQRQGVNKAAVSRRIKKLIDAKLVKLDKPNLNIDQRLKFITLTDKGRAYLKERNAIMTDIAQDITNDLNSEDIENVRQVLEVINHRIKTYSNHK
4EJV Chain:A ((5-149))
----IEDHISFLEKFINDVNTLTAKLLKDLQTEYGISAEQSHVLNMLSIEALTVGQITEKQGVNKAAVSRRVKKLLNAELVKL------------IIKLSNKGKKYIKERKAIMSHIASDMTSDFDSKEIEKVRQVLEIIDYRIQSYTS--
General information:
TITO was launched using:
RESULT:
Template:
4EJV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44329 for 790 contacts (-56.1/contact) +
2D Compatibility (PS) -14166 + (NN) -4802 + (LL) 1068
1D Compatibility (HY) -18000 + (ID) 4200
Total energy: -84429.0 ( -106.87 by residue)
QMean score : 0.669
(partial model without unconserved sides chains):
PDB file :
Tito_4EJV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EJV-query.scw
PDB file :
Tito_Scwrl_4EJV.pdb
: