Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYVENSYLSKQLCFLFYVSSKEIIKKYTNYLKEYDLTYTGYIVLMAI-ENDEKLNIKKLGERVFLDSGTLTPLLKKLEKKDYVVRTREEKDERNLQISLTEQGKAIKSPLAEISVKVFNEFNISEREASDIINNLRNFVSKNFDYSDRK
2PEX Chain:A ((17-126))
-------LDNQLSFALYSANLAMHKLYRGLLKALDLTYPQYLVMLVLWETDER-SVSEIGERLYLDSATLTPLLKRLQAAGLVTRTR-------VIIALTETGRALRSKAGAVPEQVF-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2PEX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52674 for 663 contacts (-79.4/contact) +
2D Compatibility (PS) -10597 + (NN) -2080 + (LL) 2608
1D Compatibility (HY) -11600 + (ID) 2250
Total energy: -76593.0 ( -115.52 by residue)
QMean score : 0.383
(partial model without unconserved sides chains):
PDB file :
Tito_2PEX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PEX-query.scw
PDB file :
Tito_Scwrl_2PEX.pdb
: