Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNFNQFENQNFFNGNPSDTFKDLGKQVFNYFSTPSFVTNIYETDELYYLEAELAGVNKEDISIDFNN-NTLTIQATRSAKYKSEQLILDERNFESLMRQFDFEAVDKQHITASFENGLLTITLPKIKPSNETTSSTSIPIS
3AAB Chain:A ((27-113))
-------------------------------------VDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITEPGVKYLTQRPKYVRKVIRLPYNVAKDAEISGKYENGVLTIRIP-----------------
General information:
TITO was launched using:
RESULT:
Template:
3AAB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41399 for 500 contacts (-82.8/contact) +
2D Compatibility (PS) -9249 + (NN) 414 + (LL) 1692
1D Compatibility (HY) -7600 + (ID) 1150
Total energy: -57292.0 ( -114.58 by residue)
QMean score : 0.520
(partial model without unconserved sides chains):
PDB file :
Tito_3AAB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AAB-query.scw
PDB file :
Tito_Scwrl_3AAB.pdb
: