Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKNKILTATLAVGLIAPLANPFIEISKAENKIEDIGQGAEIIKRTQDITSKRLAITQNIQFDFVKDKKYNKDALVVKMQGFISSRTTYSDLKKYPYIKRMIWPFQYNISLKTKDSNVDLINYLPKNKIDSADVSQKLGYNIGGNFQSAPSIGGSGSFNYSKTISYNQKNYVTEVESQNSKGVKWGVKANSFVTPNGQVSAYDQYLF-AQDPTGPAARDYFVPDNQLPPLIQSGFNPSFITTLSHERGKGDKSEFEITYGRNMDATYA----YVTRHRLAVDRKHDAFKNRNVTVKYEVNWKTHEVKIKSITPK |
4J0O Chain:A ((10-288)) | -------------------------------NIENIGDGAEVVKRTEDTSSDKWGVTQNIQFDFVKDKKYNKDALILKMQGFINSKTTYYNYKNTDHIKAMRWPFQYNIGLKTNDPNVDLINYLPKNKIDSVNVSQTLGYNIGGNFNSG-----NGSFNYSKTISYNQQNYISEVEHQNSKSVQWGIKANSFITSLGKMSGHDPNLFVGYKPYSQNPRDYFVPDNELPPLVHSGFNPSFIATVSHEKGSGDTSEFEITYGRNMDVTHATRRT-AGNSYLEGSRIHNAFVNRNYTVKYEVNWKTHEIKVK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J0O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48253 for 2126 contacts (-22.7/contact) +
2D Compatibility (PS) -28568 + (NN) -11290 + (LL) 2696
1D Compatibility (HY) -26400 + (ID) 9200
Total energy: -121015.0 ( -56.92 by residue)
QMean score : 0.392
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