Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRCAKKEDLNAILAIYNDAIINTTAVYTYKPQTIDERIAWFETKQRNHEPIFVFEENGSVLGFATFGSFRPWPAYQYTIEHSIYVDASARGKGIASQLLQRLIVEAKAKGYRTLVAGIDASNEASIKLHQKFNFKHAGTLTNVGYKFDYWLDLAFYELDLKD
3DR8 Chain:A ((6-167))
-IRFADKADCAAITEIYNHAVLHTAAIWNDRTVDTDNRLAWYEARQLLGYPVLVSEENGVVTGYASFGDWRSFDGFRYTVEHSVYVHPAHQGKGLGRKLLSRLIDEARRCGKHVMVAGIESQNAASIRLHHSLGFTVTAQMPQVGVKFGRWLDLTFMQLQLDE
General information:
TITO was launched using:
RESULT:
Template:
3DR8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88323 for 1186 contacts (-74.5/contact) +
2D Compatibility (PS) -17804 + (NN) -7095 + (LL) 208
1D Compatibility (HY) -16800 + (ID) 3550
Total energy: -133364.0 ( -112.45 by residue)
QMean score : 0.579
(partial model without unconserved sides chains):
PDB file :
Tito_3DR8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DR8-query.scw
PDB file :
Tito_Scwrl_3DR8.pdb
: