Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIGIDKINFYVPKYYVDMAKLAEARQVDPNKFLIGIGQTEMAVSPVNQDIVSMGANAAKDIITDE--DKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFARC-------FEMKEACYAATPAIQLAKDYLATRP--NEKVLVIATDTARYGLNSGGEPTQGAGAVAMVIAHNPSILALNEDAVAYTEDVYDFWRPT-GHKYPLVDGALSKDAYIRSFQQSW----NEYAKRQGK--SLADFASLCFHVPFTKMGKKALESIIDNADETTQERLRSGYEDA-----VDYNRYVGNIYTGSLYLSLISLLENR--DLQAGETIGLFSYGSGSVGEFYSATLVEGYKDHLDQAAHKALLNNRTEVSVDAYETFFKRFDDVEFDEEQDAVHEDRHIFYLSNIENNVREYHRPE |
| 2F9A Chain:A ((4-371)) | --VGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQDCLAFCTELEDVISMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKS----IKTFL-MQLFEKCGNTDVEGVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAVYA-EGPARPTGGAAAIAMLIGPDAPIVFESKLRGSHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFSINDADYFVFHSPYNKLVQKSFARLLY--------------YDAKVQPTTLVPKQVGNMYTASLYAAFASLVHNKHSDL-AGKRVVMFSYGSGSTATMFSLRLCE-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F9A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176880 for 2531 contacts (-69.9/contact) +
2D Compatibility (PS) -32162 + (NN) -11609 + (LL) 6308
1D Compatibility (HY) -26000 + (ID) 5100
Total energy: -245443.0 ( -96.97 by residue)
QMean score : 0.491
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