Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLNKEQRRITAEELQ---AHFEESTLSVQMIAEKLNVTTEDVEKVLAMTAPLG-----------IFSHQLQRFIHL--VWDVRDVINDNIKGNGQTPEPYTYLKGEKEDYWFLR
4KHM Chain:A ((48-132))
----QRQKKVTFDRLQVLDSHYQDVLKEVKAAASKVKANLLSVEEACSLTPPHSAKSKYGYGAKDVRSHASRAVAHINSVW--KDLLEDSV------------------------
General information:
TITO was launched using:
RESULT:
Template:
4KHM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10620 for 261 contacts (-40.7/contact) +
2D Compatibility (PS) -7301 + (NN) -2892 + (LL) 1184
1D Compatibility (HY) -2800 + (ID) 950
Total energy: -23379.0 ( -89.57 by residue)
QMean score : 0.287
(partial model without unconserved sides chains):
PDB file :
Tito_4KHM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KHM-query.scw
PDB file :
Tito_Scwrl_4KHM.pdb
: