Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKIVLITGGNKGLGYASAEAL-KALGYKVYIGSRNDVRGQQASQKLGV-----HYVQLDVTSDYSVKNAYNMIAEKEGRLDILINNAGISGQFSAPSKLTPRDV--EEVYQTNVFGIVRMMNTFVPLLEKSEQPVVVNVSSGLGSFGMVT-NPE----------TAESKVN--------------------SLAYCSSKSAVTMLTLQYAKGLPNMQ------INAADPGATNTDLVGDFSNNSKHVSEGIKPIIQLATI--GADGPTGTFINGDGEMPW |
| 3BHM Chain:A ((6-276)) | ---VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADP---TPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG--PKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVEQW |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BHM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92638 for 1834 contacts (-50.5/contact) +
2D Compatibility (PS) -24288 + (NN) -10302 + (LL) 668
1D Compatibility (HY) -11600 + (ID) 4050
Total energy: -142210.0 ( -77.54 by residue)
QMean score : 0.499
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