Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTFGKKVVLIGDGSVGSSYAFAMVTQGVADEFVIIDIAKDKVKADVQDLNHGTVHSPSPVDVKAGEYEDCKDADLVVITAGAPQKPGETRLQLVEKNTKIMKSIVKSVMDSGFDGYFLIAANPVDILTRFVKEYTGLPAERVIGSGTVLDSARLQYLISQELGVAPSSVDASIIGEHGDTELAVWSQANVAGISVYDTL--KEQTGSEAKAEEIYVNTRDAAYEIIQAKGSTYYGIALALMRISKAILNNENNVLNVSIQLDGQYGGHKGVYLGVPTLVNQHGAVKIYEMPLSAEEQALFDKSVKILEDTFDSIKYLLED
4LN1 Chain:A ((29-331))------RVVLVGTGAVGCSYAYCMINQAVAEEFVLVDVNEAKAEGEAMDLSHAVPFAPAPTRVWKGSYEDCKDADLVVITAGLPQ----TRLDLVEKNAKIFKQIVRSIMDSGFDGIFLIATNPVDILTYVTWKESGLPKERVIGSGTTLDSARFRYMLGEYFDIGPHNIHAYIIGEHGDTELPVWSHVSV-GIQKLQTLLEKDNTYNQEDLDKIFINVRDAAYHIIERKGATYYGIGMSLLRVTKAILNDENSVLTVSAYLEGQY-GQKDVYIGVPAVLNRGGVREILEVELSEDEELKFDHSVQVLKET----------


General information:
TITO was launched using:
RESULT:

Template: 4LN1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -209009 for 2571 contacts (-81.3/contact) +
2D Compatibility (PS) -32265 + (NN) -10875 + (LL) 944
1D Compatibility (HY) -33600 + (ID) 8350
Total energy: -293155.0 ( -114.02 by residue)
QMean score : 0.661

(partial model without unconserved sides chains):
PDB file : Tito_4LN1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LN1-query.scw
PDB file : Tito_Scwrl_4LN1.pdb: