Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIYQKQRNTAETQLNISIS-DDQSPSHINTGVGFLNHMLTLFTFHSGLSLNIEAQGDIDVDDHHVTEDIGIVIGQLLLEMIKDKKHFVRYGTMYIPMDETLARVVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVVINARLTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTATDDQR-VPSSKGVIE
4MU3 Chain:A ((10-192))
-IGEVKRETKQTNVSVKINLDGHGVSDSSTGIPFLDHMLDQLASHGLFDVHVRATGDTHIDDHHTNEDVALAIGTALLKALGERKGINRFGDFTAPLDEALIHVSLDLSGRPYLGYNLEIPTQRVGTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKNSHHIIEATFKAFARALRQA-TESDPRRG---------
General information:
TITO was launched using:
RESULT:
Template:
4MU3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -144809 for 1534 contacts (-94.4/contact) +
2D Compatibility (PS) -19203 + (NN) -7524 + (LL) 668
1D Compatibility (HY) -12000 + (ID) 3800
Total energy: -186668.0 ( -121.69 by residue)
QMean score : 0.481
(partial model without unconserved sides chains):
PDB file :
Tito_4MU3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MU3-query.scw
PDB file :
Tito_Scwrl_4MU3.pdb
: