Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNGTVKWFNAEKGFGFIEQENGGDVFVHFSGIASDGYKTLEEGQKVTFEITEGQRGDQAVNVQTV
3PF4 Chain:A ((1-63))
MLEGKVKWFNSEKGFGFIEVEGQDDVFVHFSAIQGEGFKTLEEGQAVSFEIVEGNRGPQAANV---
General information:
TITO was launched using:
RESULT:
Template:
3PF4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27377 for 409 contacts (-66.9/contact) +
2D Compatibility (PS) -6386 + (NN) 461 + (LL) 364
1D Compatibility (HY) -6800 + (ID) 2200
Total energy: -41938.0 ( -102.54 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_3PF4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PF4-query.scw
PDB file :
Tito_Scwrl_3PF4.pdb
: