Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIILSASVKNLREISVKEKFLWLNAKSYLISVFAPFILLPWIDLLSAFLLYLGFLALFSVLEFFDEDIADIIIAKSKIKTKTKCYRA
1R4G Chain:A ((555-564))
-----------------------------------------------------------VMELVEEDIE------------------
General information:
TITO was launched using:
RESULT:
Template:
1R4G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -239 for 30 contacts (-8.0/contact) +
2D Compatibility (PS) -1048 + (NN) -170 + (LL) 7832
1D Compatibility (HY) -2000 + (ID) 250
Total energy: 4125.0 ( 137.50 by residue)
QMean score : 0.216
(partial model without unconserved sides chains):
PDB file :
Tito_1R4G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R4G-query.scw
PDB file :
Tito_Scwrl_1R4G.pdb
: