Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MADSLAGIDQVTSLHKNNELQLLCFRLGKNKDLYAVNVFKIREVVKYHGNLTIISHENNSLVEGLIIIRELTIPLIDMKKWFYYDSQNKSKDLRPYRIEKEKGEDDIVMICEFSRWTIGVRIYEADRILSKKWTEMEQSAGLGGSAGNNKLVSRTRYFDGRLVQVVDIEKMLIDVFPWIEDEKHNDLETLSKIHSNQCVLLADDSPSVLKTMQMILDKLGVKHIDFINGKTLLEHLFNPTTDVSNIGLIITDLEMPEASGFEVIKQVKNNPLTSKIPIVVNSSMSGSSNEDMARSLKADDFISK--SNPKDIQRVVKQFLELA |
1NXV Chain:A ((4-116)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDI-----IILDLMLPEIDGLEVAKTIRK---TSSVPILMLSAKDSEFDKVIGLELGADDYVTKPFSN-RELQARVKALLRRS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NXV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71676 for 873 contacts (-82.1/contact) +
2D Compatibility (PS) -11674 + (NN) -5370 + (LL) 14396
1D Compatibility (HY) -9200 + (ID) 1800
Total energy: -85324.0 ( -97.74 by residue)
QMean score : 0.685
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