Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMADSLAGIDQVTSLHKNNELQLLCFRLGKNKDLYAVNVFKIREVVKYHGNLTIISHENNSLVEGLIIIRELTIPLIDMKKWFYYDSQNKSKDLRPYRIEKEKGEDDIVMICEFSRWTIGVRIYEADRILSKKWTEMEQSAGLGGSAGNNKLVSRTRYFDGRLVQVVDIEKMLIDVFPWIEDEKHNDLETLSKIHSNQCVLLADDSPSVLKTMQMILDKLGVKHIDFINGKTLLEHLFNPTTDVSNIGLIITDLEMPEASGFEVIKQVKNNPLTSKIPIVVNSSMSGSSNEDMARSLKADDFISK--SNPKDIQRVVKQFLELA
1NXV Chain:A ((4-116))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDI-----IILDLMLPEIDGLEVAKTIRK---TSSVPILMLSAKDSEFDKVIGLELGADDYVTKPFSN-RELQARVKALLRRS


General information:
TITO was launched using:
RESULT:

Template: 1NXV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71676 for 873 contacts (-82.1/contact) +
2D Compatibility (PS) -11674 + (NN) -5370 + (LL) 14396
1D Compatibility (HY) -9200 + (ID) 1800
Total energy: -85324.0 ( -97.74 by residue)
QMean score : 0.685

(partial model without unconserved sides chains):
PDB file : Tito_1NXV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NXV-query.scw
PDB file : Tito_Scwrl_1NXV.pdb: