Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLFISATNTNAGKTTCARLLAQYCNACGVKTILLKPIETGVNDAINHSSDAHLFLQDNRLLDRSLTLKDISFYRYHKASAPLIAQQEEDPNAPIDTDNLTQRLHNFTKTYDLVIVEGAGGLCVPITLEENMLDFALKLKAKMLLISHDNLGLINDCLLNDFLLKSYQLDYKIAINLRGNNTAFYSVSLPYIELFNKRSNNPIVIFQQSLKELMSFALK
2QMO Chain:A ((4-220))
-LFISATNTNAGKTTCARLLAQYCNACGVKTILLKPIETGVNDAINHSSDAHLFLQDNRLLDRSLTLKDISFYRYHKVSAPLIAQQEEDPNAPIDTDNLTQRLHNFTKTYDLVIVEGAGGLCVPITLEENMLDFALKLKAKMLLISHDNLGLINDCLLNDFLLKSHQLDYKIAINLKGNNTAFHSISLPYIELFNTRSNNPIVIFQQSLKVLMSFALK
General information:
TITO was launched using:
RESULT:
Template:
2QMO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -153487 for 1768 contacts (-86.8/contact) +
2D Compatibility (PS) -23385 + (NN) -10572 + (LL) 208
1D Compatibility (HY) -32000 + (ID) 10500
Total energy: -229736.0 ( -129.94 by residue)
QMean score : 0.521
(partial model without unconserved sides chains):
PDB file :
Tito_2QMO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QMO-query.scw
PDB file :
Tito_Scwrl_2QMO.pdb
: