Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLNYDFLELVDDEPQRNTSLTSAIDKALADKKLARQNKPRVRVKDNLSLSETLDAYGRELSRLKNQQETIKASTIESSNLNSIVNKIKSGLPFGTISAFRPFKEAFIKDFTQDERELLVEAYKSGYKASQLDKVSKKWRDDPNPIDASYLADAFLREYRTIALKLSTALGKPFVNKFLNPKSETTMKDFMSSEKFVKKYRFTQKDNIKRTQELKSLLDQKRHFLGYLQVTGYWKDKLNDPLLPSKEVSFFVFQNEPSNSFNLKDQLLDLAKYFNQEAICYCQNAETGKVDLVLATEKDFGKVDMTFTGITFTIPLTQSITRLHNKVYTFFDKQGKDNYGVFFDELSTTKLKAMSIPKIADEFYRHLENRVKSFIRARQYHGSPRTFDADDIEKYELQAIKRLDLQRCAKSKSFKASYNHNIKINNLANALRQGKEVSKTLITKVLANTIDTDAGYCFISDLATQLGNISPRLSKSIVTAIEQAEGIRLLYALIDKVSYNSLHNTLNFIFDIDNPMSDQSLNELVVEVPREALKNVKLPQIKNELTSQIFDGAYQFRGNDYQFKG |
| 1HKQ Chain:A ((89-112)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VERMRWVFHVKYREGQGCVELGFSPTIIPHLTMLHKEFTSYQLK---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HKQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2043 for 87 contacts (-23.5/contact) +
2D Compatibility (PS) -2645 + (NN) 436 + (LL) 35220
1D Compatibility (HY) -1600 + (ID) 150
Total energy: 29218.0 ( 335.84 by residue)
QMean score : -0.016
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