Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTFEMLYSKIHRATITDANLNYIGSITIDEDLAKLAKLREGMKVEIVDVNNGERFSTYVILGKKRGK-ICVNGAAARKVAIGDVVIILAYASMNEDEINTHKPSIVLVDEKNEILEKG
4AZD Chain:A ((18-131))
MIRTMLQGKLHRVKVTHADLHYEGSCAIDQDFLDAAGILENEAIDIWNVTNGKRFSVYAIAAERGSRIISVNGAAAHCASVGDIVIIASFVTMPDEEARTWRPNVAYFEGDNEMKRT-
General information:
TITO was launched using:
RESULT:
Template:
4AZD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79721 for 845 contacts (-94.3/contact) +
2D Compatibility (PS) -12395 + (NN) -2128 + (LL) 176
1D Compatibility (HY) -7600 + (ID) 2200
Total energy: -103868.0 ( -122.92 by residue)
QMean score : 0.653
(partial model without unconserved sides chains):
PDB file :
Tito_4AZD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AZD-query.scw
PDB file :
Tito_Scwrl_4AZD.pdb
: