Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKVLYALMGFLLVFSALKADDFLEEANETAPANLNHPMQDLNAIQGSFFDKNRSKMSNTLNIDYFQGQTYKIRLRYAMATLLFFSKPISDFVLGDKVGFDAKILESNDRILLIKPLQIGVDSNISVIDSEGKIFSFYVFSTTFTSSKHPNLQVFIEDKNYYTNAFIKPQKENQENMSENAPKDAQKNNKPLKEEKEETKEKEEETIIIGDNTNAMKIIKKDIQKGYKALKSSQRKWYCLWACSKKSKLSLMPKEIFNDKQFTYFKFDKRLALSKFPVIYKVVDGYDNPVNTRIVGDYIIAEDVSTKWTLRLGKDYLCIRFVKRRKGE |
| 2FUT Chain:A ((586-661)) | --------------------------------------------------------------------------------------------------------------------LPDAANSNITSIGGKGK--DFWVFGTNYTNDPKPGTDEALERGEWRVE--ITPKKAAAEDYYLNVIQIADNTQQKLHEVKRIDGDKVVGVQLADRIVTFSKTSETVDRPFGFSVVGKGTFKFVMTDLLPGTWQVLKDGKILYPALSAKGDDGALYFEGTEGTYRFLR--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FUT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 20854 for 318 contacts (65.6/contact) +
2D Compatibility (PS) -7585 + (NN) 316 + (LL) 12684
1D Compatibility (HY) -2400 + (ID) 1150
Total energy: 22719.0 ( 71.44 by residue)
QMean score : 0.192
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