Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRMLAEFEKIQAILMAFPHEFGDWAYCIEEARESFLHIIQTIAKHAKVLVCVHTNDTIGYETLKNLP-GVEIARIDTNDTWARDFGA-------ISVENHGVLECLDFGFNGWGLKYP---SNLDNQVNFKLKHLGFLKHPLKTMPYILEGGSIESDGAGSILTNTQCLLEKNRNPHLNQNGIETMLKKELGAKQVLWYSYGYLKGDDTDSHTDTLARFLNKDTIVYSACEDENDEHYTALKKMQEELKTFKKLDGTPYKLIPLEIPKAVYNENQQ-----------------RLPATYVNFLLCNNALIVPTYNDP-NDTLILETLRQHTP-LEVIGVD-CNTLIKQHGSLHCVTMQLY |
| 2Q3U Chain:A ((17-370)) | -----AEWDSHAQTWIGWPERQDNWRHNALPAQRVFAGVAKAISKFEPVTVCA--SPAQWENARKQLPEDIRVVEMSMNDSWFRDSGPTFIVRKR----NRNIA-GIDWNFNAWGGANDGCYNDWSHDLLVSRKILALERIPRFQHSMILEGGSIHVDGEGTCLVTEECLLNKNRNPHMSKEQIEEELKKYLGVQSFIWLPRGLYGDEDTNGHIDNMCCFARPGVVLLSWTDDETDPQYERSVEALSVLSNSIDARGRKIQVIKLYIPEPLYMTEEESSGITQDGEAIPRLAGTRLAASYVNFYIANGGIIAPQFGDPIRDKEAIRVLSDTFPHHSVVGIENAREIVLAGGNIHCITQQQP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q3U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187477 for 2760 contacts (-67.9/contact) +
2D Compatibility (PS) -34794 + (NN) -17293 + (LL) 1428
1D Compatibility (HY) -16400 + (ID) 4850
Total energy: -259386.0 ( -93.98 by residue)
QMean score : 0.545
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