Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFGKSSNDTQENPKDALKSTNFHEKHTKPTETTELVEENKA--------LTTEKERLERENKNLTADKENLTKEKT-ELQKQVNELKNSKQVLENE----KADWLREKENLTKDRE-----NLTKEKTELTEKNKVLTTEKERLATEKENLTKEKTESQKQVNELKNSK----QVLENEKADLTNENTKLKTDKTDLTEKNQRLTTEKTELNNKITGLATEKERLAADKENLTKESRQRKPN |
| 1QVR Chain:A ((378-540)) | ----------------------------PDKAIDLIDEAAARLRMALESAPEEIDALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWEREREILRKLREAQHRLDEVRREIELAERQYDLNRAAELRYGE---LPKLEAEVEALSEKLRGARFVRLEVTEEDIAEIVSRWTGIPVSKLLEGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAGLKDPNRPI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QVR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 87703 for 745 contacts (117.7/contact) +
2D Compatibility (PS) -15400 + (NN) -9601 + (LL) 984
1D Compatibility (HY) -3200 + (ID) 2050
Total energy: 58436.0 ( 78.44 by residue)
QMean score : 0.412
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