Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDKGKSVKSTKKSVGMPPKTPKTDNNANSHVDNEFLILQVNDAVFPIGSYTHSFGLETYIQQKKVTNKESALEYLKANLSSQFLYTEMLSLKLTYESTLQQDLKKILGIEEVIMLSTSPMELRLANQKLGNRFIKTLQAMNELDMGAFFNAYAQTTKDPTHATSYGVFAASLNMELKKALRHYLYAQTSNMVINCVKSVPLSQNDGQKILLSLQSPFNQLIEKTLELDESHLCAASVQNDIKAMQHESLYSRLYMS |
1KLX Chain:A ((3-60)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGTVKKDLKKAIQYYVKACELNEMFGCLSLVSNSQINKQKLF--------QYLSKACELNSGNGCRFLGDFYENGKYVKKDLRKAAQY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KLX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10006 for 374 contacts (-26.8/contact) +
2D Compatibility (PS) -6091 + (NN) -2953 + (LL) 11400
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -12950.0 ( -34.63 by residue)
QMean score : 0.261
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