Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLGLVLLYVGIVLISNGICGLTKVDPKSTAVMNFFVGGLSIVCNVVVITYSALHPTAPVEGAEDIVQVSHHLTSFYGPATGLLFGFTYLYAAINHTFGLDWRPYSWYSLFVAINTVPAAILSHYSDMLDDHKVLGITEGDWWAIIWLAWGVLWLTAFIENILKIPLGKFTPWLAIIEGILTAWIPAWLLFIQHWV |
2WW9 Chain:C ((58-78)) | ----------------------RVDSLVVLFLSVGFIFSVIAL-------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WW9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1946 for 77 contacts (-25.3/contact) +
2D Compatibility (PS) -1925 + (NN) 894 + (LL) 14480
1D Compatibility (HY) -1600 + (ID) 150
Total energy: 9753.0 ( 126.66 by residue)
QMean score : -0.192
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