Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIFLGMALAFSVSMAEKSGAFLGGGFQYSNLENQNTTRTPSANNNTPINTSMFGNNQAAPAQETPSVINTNNYGQMYGVDAMAGYKWFFGKTKRFGFRTYGYYSYNHANLSFVGSKLGIMDGASQVNNFTYGVGFDALYNFYESKEGYNTAGLFVGFGLGGDSFIVQGESYLKSQMQICNNTAGCSASMNTSYFQMPVEFGFRSNFSKHSGIEVGFKLPLFTNQFYKERGVDGSVDVFYKRNFSIYFNYMINL |
| 4YOI Chain:A ((188-249)) | ------------------------------------------------------FEDKQTHQLQLTDKYCTINVVAWLYAA-VLNGCKWFV-KPTRVGIVTYNEWALSNQFTEFVGTQSIDMLAHRTGVSVEQMLAAIQSLHAGFQGKTILGQSTLEDEFTPDDVNMQVMGVVMQ-------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YOI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9388 for 271 contacts (-34.6/contact) +
2D Compatibility (PS) -6065 + (NN) 3215 + (LL) 5932
1D Compatibility (HY) -6000 + (ID) 900
Total energy: -13206.0 ( -48.73 by residue)
QMean score : -0.134
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