Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKIVLVAIALLISGCASYKITPEHVTSYNNGIQVMTSTQARSKVQLEIAQSKLKGLNESPLVLYVAAQVLEGKPVVFSRKAISVSINQTNLPVLSLRQVMKSSFDFEGILQSFNISVPTAPIDNINMITPPMFYYGQGSFLAYNGMMYGGMGMYGPGFGMMMMDDVEEQEVMQESRQALKILAINYLKKNTLNVENKAKGGFVVVDTKNLKTPGVVVVKVFLEDEIHTFKIDISKM |
| 2JMK Chain:A ((41-75)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DTDVMMDFISRFARTDEIMP-EDKTVGFVVVNADKKLMSVSFSDIDENMKKVIKATAEKFKN |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JMK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 374 for 107 contacts (3.5/contact) +
2D Compatibility (PS) -3804 + (NN) -2455 + (LL) 12796
1D Compatibility (HY) -1200 + (ID) 250
Total energy: 5461.0 ( 51.04 by residue)
QMean score : 0.202
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