Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFASVFASLGTRIMFVVLAALLGLGGLFIGFVKVMQKDVLVQLMEHLETGQYKKREKTLAYMTKLLEQGIHKYYKNSDNATARKMALDYFKRINDDKGMIYMVVVDKNGVVLFDPVNPKTVGQSGLSLQSVDGVYYVRGYLEAAKKGGGYTYYKMPKYDGGVPEKKFAYSHYDEVSQMVIAATSYYTDINTENQAIKEGVNKVFNENTTKLFLWILTATIALVVLTLIYAKLRIVKRIDELVLKINAFSRGDKDLRAKIDVGDRNDEISQVGRGINLFVENARLIMEEIKGISTLNKTSMDKLVQITQETQKSMKNSSTTLNSVKNKATDIASMMNASIEQSQGLRKRLIETQGLVKESKDAIGDLFSQITESAHTEEELSSKVEQLSRNADDVKSILDIINDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRNLAGRTQKSLAEINSTIMVIVQEINDVSSQMNLNSQKMERLSDMSKSVQETYEKMSSNLSSVVLDSNQSMDDYAKSGHQIEAMVSDFAEVEKVASKTLADSSDILNITTHVSGTTMNLDKQVNLFKT |
| 3G6B Chain:A ((104-218)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EASSQIGETLENIRSIEKLIQNIMRIARETNILALNATIEAARAGEAGKGFMIVANEVQNLSNETN----EVTKQIVEKAREILE-SSQRSL--ENLEFMANLFETVGKTLQNMVRFMENIVKLLQEVRNSLDTSKESLSEKSAEIDSATKVLEETA----------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G6B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2334 for 608 contacts (3.8/contact) +
2D Compatibility (PS) -12448 + (NN) -3431 + (LL) 30852
1D Compatibility (HY) -8800 + (ID) 2250
Total energy: 6257.0 ( 10.29 by residue)
QMean score : 0.372
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