Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFYKRVLKLHHFRNLGKNSPTK----LLLNSSFDEKHGGLVVLVGENNVGKSNVLEALKIFNDADIKLCSEEDYFKDHEKDTLLSLEE
4M1M Chain:A ((1039-1084))
------------------NYPTRPSIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQL
General information:
TITO was launched using:
RESULT:
Template:
4M1M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2649 for 177 contacts (15.0/contact) +
2D Compatibility (PS) -4614 + (NN) -1530 + (LL) 1616
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -5529.0 ( -31.24 by residue)
QMean score : 0.275
(partial model without unconserved sides chains):
PDB file :
Tito_4M1M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4M1M-query.scw
PDB file :
Tito_Scwrl_4M1M.pdb
: