Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTFEILKHLQADAIVLFMKVHNFHWNVKGTDFFNVHKATEEIYEGFADMFDDLAERIVQLGHHPLVT---LSEAIKLTRVKEETKTSFHSKDIFKEILEDYKHLEKEFKELSNTAEKEGDKVTVTYADDQLAKLQKSIWMLEAHLA
3KWO Chain:A ((10-146))
------LLQMQADAHHLWVKFHNYHWNVKGLQFFSIHEYTEKAYEEMAELFDSCAERVLQLGEKAITCQKVLMENAKSPKV---AKDCFTPLEVIELIKQDYEYLLAEFKKLNEAAEKESDTTTAAFAQENIAKYEKSLWMIGATLQ
General information:
TITO was launched using:
RESULT:
Template:
3KWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43265 for 961 contacts (-45.0/contact) +
2D Compatibility (PS) -14537 + (NN) -8866 + (LL) 1036
1D Compatibility (HY) -12000 + (ID) 3000
Total energy: -80632.0 ( -83.90 by residue)
QMean score : 0.679
(partial model without unconserved sides chains):
PDB file :
Tito_3KWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KWO-query.scw
PDB file :
Tito_Scwrl_3KWO.pdb
: