Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKFASVLVQLKTLALEKIERKLESKRLELQQNEREVLDKQAQLSAFKNPELGGMSLFLQTQQLKSALRMEIEYYQQEGENLTKDLKILEKDYLLANQELEKAKIILEKEKQKEKEILEKKEQALLDENAMILHWQKGGLHA |
1NKP Chain:B ((39-78)) | ------------------------------------------------------AQILDKATEYIQYMRRKNHTHQQDIDDLKRQNALLEQQVRALGGC------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3207 for 155 contacts (20.7/contact) +
2D Compatibility (PS) -4512 + (NN) -2999 + (LL) 9764
1D Compatibility (HY) 0 + (ID) 300
Total energy: 5160.0 ( 33.29 by residue)
QMean score : 0.368
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