Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAIVVTITSGKGGVGKSTTTANLAIGLAESGKKVVAVDFDIGLRNLDMILGLENRIVYDVVDVMEKNCNLSQALITDKKTKNLSFLAASQSKDKNI-LDKEKVAILINALRADFDYILIDSPAGIESGFEHAILHADMALVVVTPEVSSLRDSDRVIGIIDAKSNRAKSGEEVHKHLIINRLKPELVANGEMISIEEVLKILCLPLIGIIPEDHHIISATNKGEPVIRTDCESAKAYQRITRRILGEEVEYVEFKAKRGFFSALKGIFS |
1ION Chain:A ((4-234)) | ---IISIVSGKGGTGKTTVTANLSVALGEMGRKVLAVDGDLTMANLSLVLGVDD-VNITLHDVLAGDAKLEDA-IYMTQFENVYILPGAVDWEHVIKADPRKLPEVIKSLKGKYDFILIDCPAGLQLRAMSAMLSGEEAILVTNPEISCLTDTMKV-GMVLKKAGLAILG------FILNRYG----RSERDIPPEAAQDVMDVPLLAVIPEDPVIREGTLEGIPAVKYKPESKGAQAFIK---LAEEVDKLAGIKAKI---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1ION.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -123789 for 2119 contacts (-58.4/contact) +
2D Compatibility (PS) -24392 + (NN) -4453 + (LL) 3176
1D Compatibility (HY) -18000 + (ID) 4150
Total energy: -171608.0 ( -80.99 by residue)
QMean score : 0.446
|
|
|