Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMREILTNRFFPSLFKKRLDFSNRVVLGLGSNLKNPLKILKSCFLYFKNHSKIGKIFSSPIYINPPFGYTNQPNFYNATIILKTSLGLRHFFALVFYIERRFGRARKRDFKDAPRTLDIDIIAFNQVILRQNDLTLPHPKWSERDSVLVPLTLQQILFKREEW
3HT0 Chain:A ((5-128))
--------------------------IAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAE-RWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGAMLWPLFEIAPELVFPDG
General information:
TITO was launched using:
RESULT:
Template:
3HT0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82429 for 860 contacts (-95.8/contact) +
2D Compatibility (PS) -13022 + (NN) -5074 + (LL) 2444
1D Compatibility (HY) -6800 + (ID) 2050
Total energy: -106931.0 ( -124.34 by residue)
QMean score : 0.534
(partial model without unconserved sides chains):
PDB file :
Tito_3HT0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HT0-query.scw
PDB file :
Tito_Scwrl_3HT0.pdb
: