Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYFKILATSFSLFLNSWLKRSKLSSVPFLSKRQISKSVQAIKIDANNKAIKYPPSVDNTVHNRMLSGSLNFNTENTNPKKNPTTTEKWIKF
2JTV Chain:A ((34-46))
-----------LVDLGWLKRSSVDSRATHYQITERGTSAALRS------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2JTV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2157 for 38 contacts (-56.8/contact) +
2D Compatibility (PS) -1231 + (NN) 1190 + (LL) 3692
1D Compatibility (HY) -1600 + (ID) 300
Total energy: -406.0 ( -10.68 by residue)
QMean score : -0.020
(partial model without unconserved sides chains):
PDB file :
Tito_2JTV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JTV-query.scw
PDB file :
Tito_Scwrl_2JTV.pdb
: