Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNGSNHMKNKTLVISGATRGIGKAILYRFAQSGVNIAFTYNKNVEEANKIIEDVEQKYSIKAKAYPLNVLEPEQYTELFKQVDADFDRVDFFISNAIIYGRSVVGGFAPFMRLKPKGLNNIYTATVLAFVVGAQEAAKRMQKIGGGAIVSLSS----TGNLVYMPNYAGHGNSKNAVETMVKYAAVDLGEFNIRVNAVSGGPIDTDALKAFPDYVEIKEKVEEQSPLKRMGNPNDLAGAAYFLCDETQSGWLTGQTIVVDGGTTFK |
| 2P68 Chain:A ((5-246)) | ------LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSG-ERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKL------FLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGN-VGQVNYS---TTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSE--EIKQKYKEQIPLGRFGSPEEVANVVLFLCSELAS-YITGEVIHVNGGMF-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P68.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124221 for 1997 contacts (-62.2/contact) +
2D Compatibility (PS) -25251 + (NN) -2060 + (LL) 160
1D Compatibility (HY) -16800 + (ID) 4000
Total energy: -172172.0 ( -86.22 by residue)
QMean score : 0.592
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