Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEDRLSAEDKKFLEVERALKEAALNPLRHATEELFGDFLKMENITEICYNGDKVVWVLKNNGEWQPFDVRNKKAFSLSRLMHFARCCASFKKKTIDNYENPILSSNLANGERVQIVLSPVTVNDETISISIRIPSKTTYPHSFFEEQGFYNLLDNKEQAISAIKDGIAIGKNVIVCGGTGSGKTTYIKSIMEFIPKEERIISIEDTEEIVFKHHKNYTQLFF----GGNITSADCLKSCLRMRPDRIILGELRSSEAYDFYNVLCSGHKGTLTTLHAGSSEEAFIRLANMSSSNSAARNIKFESLIEGFKDLIDMIVHINHHKQCDEFYIKHR |
4IHQ Chain:A ((192-372)) | -----------------------------------------------------------------------------------------------------PVVDASLPDGSRVNFVYG-VDISRRGSNLTVRKFSRV--PTSITQLIMFGTLSSMMAAYIWTMLDE---GMNLFVCGETASGKTTTLNAITAFIPPNLKIVTIEDTPELTVPHSNWVAEVTRETGGEGTIKLFDLLKAALRQRPNYILVGAIRDKEGNVAFQAMQTGH-SVMATFHAANITTLIQRLTGYPIEVPKSYINNLNIALFQTALYDKKGNLIRRVVEVDEIIDIDP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4IHQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -51109 for 1250 contacts (-40.9/contact) +
2D Compatibility (PS) -19104 + (NN) -6092 + (LL) 8176
1D Compatibility (HY) -11200 + (ID) 2850
Total energy: -82179.0 ( -65.74 by residue)
QMean score : 0.366
|
|
|