Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLETPKVLLKNLQDCKIHFIGIGGIGISGLAKYLKAQGAKISGSDI-AISPSVKYLKALGVEINIPHDPKAINH--QDVIIHSAIIKEDNTEIQRAKELEIPILSRKDALY-SILKDKRVFSVCGAHGKSSITAML------SAICPAFGAIIGAHSKEFDSNVR---------ESADMSLVFEADESD-------SSFLFSNPFCAIVPNTEPEHLEHYDHDLERFFFAYKYFLDHAQKRVIYKEDPFLKNYSKDAI--VLEKK-----DIYNIQYILKDGEPYT--SFEL---KNLGAFLVWGL-GEHNATNASLAILSALDE--LNLEEIRNNLLNFKGIKKRFDILQKNNLILIDDYAHHPTEIGATLKSARIYANLLNTQEKIIVIWQAHKYSRLMDNLEEFKKCFLEHCDRLIILPVYSASEVKRDIDLKAHFKHYNPTFIDRVRKKGDFLELLVNDNVVETIEKGFVIGFGAGDITYQLRGEM |
| 3EAG Chain:A ((20-326)) | -----------------------------LAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVAKRGMDVVEAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYAGLAPGF--LIGGVPENFGVSARLPQTPRQDPNSQSPFFVIEADEYDTAFFDKRSKFVHYRPRTAVLNNLEFDHADIF-ADLGAIQTQFHYLV-----RTVPSEGLIVCNGRQQSLQDTLDKGCWTPVEKFGTEHGWQAGEANADGSFDVLLDGKTAGRVKWDLMGRHNRMNA-LAVIAAARHVGVDIQTACEALGAFKNVKR------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EAG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137027 for 2065 contacts (-66.4/contact) +
2D Compatibility (PS) -28862 + (NN) -11209 + (LL) 13112
1D Compatibility (HY) -12800 + (ID) 3750
Total energy: -180536.0 ( -87.43 by residue)
QMean score : 0.452
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