Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDKMNKVVLHKEYSGFVRFFHWVRALSIFTLIATGFYIAYPFLQPNSSFYKGVYLLQAYVRSFHVMFGFLLISALIFRTYLFFTKESLMERRSFSQLLSPK--AWIDQMKAYFLISDKPHTKGLYNPIQLVAYFTLVVLIVLMSLSGIVLYYNVYHEGLGAFLANAFKWFEALCGGLANVRFIHHLATWGFILFVPVHVYMVFFHSIRYDSSGADSMINGYGYTKE |
2CJB Chain:A ((230-281)) | ------------------------------------------------------------------------SARIFRTFEKIVLEELLEPLGYREMIFPKLVTWEVWMKS-------GHAKGVYPEIYYVCPPQTRDPDYWEEVADYYKVTHEVPTKLIKEKIAEPIGGMCYAQCPPFWMYVAGETLPNEEIPVKVFDRSGTSHRYESGGIHGIERVDEFHRIEI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CJB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2090 for 195 contacts (-10.7/contact) +
2D Compatibility (PS) -5167 + (NN) -1442 + (LL) 7152
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -7347.0 ( -37.68 by residue)
QMean score : -0.001
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