Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDKMNKVVLHKEYSGFVRFFHWVRALSIFTLIATGFYIAYPFLQPNSSFYKGVYLLQAYVRSFHVMFGFLLISALIFRTYLFFTKESLMERRSFSQLLSPK--AWIDQMKAYFLISDKPHTKGLYNPIQLVAYFTLVVLIVLMSLSGIVLYYNVYHEGLGAFLANAFKWFEALCGGLANVRFIHHLATWGFILFVPVHVYMVFFHSIRYDSSGADSMINGYGYTKE
2CJB Chain:A ((230-281))------------------------------------------------------------------------SARIFRTFEKIVLEELLEPLGYREMIFPKLVTWEVWMKS-------GHAKGVYPEIYYVCPPQTRDPDYWEEVADYYKVTHEVPTKLIKEKIAEPIGGMCYAQCPPFWMYVAGETLPNEEIPVKVFDRSGTSHRYESGGIHGIERVDEFHRIEI


General information:
TITO was launched using:
RESULT:

Template: 2CJB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2090 for 195 contacts (-10.7/contact) +
2D Compatibility (PS) -5167 + (NN) -1442 + (LL) 7152
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -7347.0 ( -37.68 by residue)
QMean score : -0.001

(partial model without unconserved sides chains):
PDB file : Tito_2CJB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2CJB-query.scw
PDB file : Tito_Scwrl_2CJB.pdb: