Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLYHYYFKTPKSFPLEYLHLCANESHLLRLDFDATNFSHHTPMNTPLKLSVQALERYFLGQLFEFDAPLDLIGTFFQKQVWSALMTIPYGKTKSYDEIAKLINNPKSCRAIGNANRNNPISLIVPCHRVVRKNGALGGYNGGIEVKKWLLEFESKILNERAKNFLIS
1T38 Chain:A ((105-185))
--------------------------------------------------------------------------SFTRQVLWKLLKVVKFGEVISYQQLAALAGNPKAARAVGGAMRGNPVPILIPSHRVVCSSGAVGNYSGGLAVKEWLLAHEGHRL----------
General information:
TITO was launched using:
RESULT:
Template:
1T38.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17411 for 575 contacts (-30.3/contact) +
2D Compatibility (PS) -8935 + (NN) -4173 + (LL) 5948
1D Compatibility (HY) -6800 + (ID) 1750
Total energy: -33121.0 ( -57.60 by residue)
QMean score : 0.530
(partial model without unconserved sides chains):
PDB file :
Tito_1T38.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T38-query.scw
PDB file :
Tito_Scwrl_1T38.pdb
: