Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSPDVLLDSFKIALVKKDSKLAFSLIERLSLEQIKSLDLDALLSLKEMIAQSIELLEKEKEELQSQMHKAKQIQKFLS
1R8E Chain:A ((80-104))
----------------------------------------------------LFAFYTEQERQIREKLDFLSALEQTIS
General information:
TITO was launched using:
RESULT:
Template:
1R8E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6344 for 90 contacts (70.5/contact) +
2D Compatibility (PS) -2996 + (NN) -3194 + (LL) 4808
1D Compatibility (HY) -2000 + (ID) 0
Total energy: 2962.0 ( 32.91 by residue)
QMean score : 0.730
(partial model without unconserved sides chains):
PDB file :
Tito_1R8E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R8E-query.scw
PDB file :
Tito_Scwrl_1R8E.pdb
: